neuroml.bio
Class Biophysics

java.lang.Object
  neuroml.bio.Biophysics

Direct Known Subclasses:

Level3Biophysics

public class Biophysics
extends java.lang.Object

Description of biophysical properties of a cell.

Java class for Biophysics complex type.

The following schema fragment specifies the expected content contained within this class.

 <complexType name="Biophysics">
   <complexContent>
     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
       <sequence>
         <element name="mechanism" type="{http://morphml.org/biophysics/schema}Mechanism" maxOccurs="unbounded"/>
         <element name="specificCapacitance" type="{http://morphml.org/biophysics/schema}SpecCapacitance"/>
         <element name="specificAxialResistance" type="{http://morphml.org/biophysics/schema}SpecAxialResistance"/>
         <element name="initialMembPotential" type="{http://morphml.org/biophysics/schema}InitialMembPotential" minOccurs="0"/>
         <element name="ionProperties" type="{http://morphml.org/biophysics/schema}IonProperties" minOccurs="0"/>
       </sequence>
       <attribute name="units" use="required" type="{http://morphml.org/biophysics/schema}Units" />
     </restriction>
   </complexContent>
 </complexType>
 

Field Summary

protected InitialMembPotential	initialMembPotential
protected IonProperties	ionProperties
protected java.util.List<Mechanism>	mechanism
protected SpecAxialResistance	specificAxialResistance
protected SpecCapacitance	specificCapacitance
protected Units	units

Constructor Summary

Biophysics()

Method Summary

InitialMembPotential	getInitialMembPotential() Gets the value of the initialMembPotential property.
IonProperties	getIonProperties() Gets the value of the ionProperties property.
java.util.List<Mechanism>	getMechanism() Gets the value of the mechanism property.
SpecAxialResistance	getSpecificAxialResistance() Gets the value of the specificAxialResistance property.
SpecCapacitance	getSpecificCapacitance() Gets the value of the specificCapacitance property.
Units	getUnits() Gets the value of the units property.
void	setInitialMembPotential(InitialMembPotential value) Sets the value of the initialMembPotential property.
void	setIonProperties(IonProperties value) Sets the value of the ionProperties property.
void	setSpecificAxialResistance(SpecAxialResistance value) Sets the value of the specificAxialResistance property.
void	setSpecificCapacitance(SpecCapacitance value) Sets the value of the specificCapacitance property.
void	setUnits(Units value) Sets the value of the units property.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

mechanism

protected java.util.List<Mechanism> mechanism

specificCapacitance

protected SpecCapacitance specificCapacitance

specificAxialResistance

protected SpecAxialResistance specificAxialResistance

initialMembPotential

protected InitialMembPotential initialMembPotential

ionProperties

protected IonProperties ionProperties

units

protected Units units

Constructor Detail

Biophysics

public Biophysics()

Method Detail

getMechanism

public java.util.List<Mechanism> getMechanism()

Gets the value of the mechanism property.

This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the mechanism property.

For example, to add a new item, do as follows:

    getMechanism().add(newItem);
 

Objects of the following type(s) are allowed in the list Mechanism

getSpecificCapacitance

public SpecCapacitance getSpecificCapacitance()

Gets the value of the specificCapacitance property.

Returns:

possible object is SpecCapacitance

setSpecificCapacitance

public void setSpecificCapacitance(SpecCapacitance value)

Sets the value of the specificCapacitance property.

Parameters:

value - allowed object is SpecCapacitance

getSpecificAxialResistance

public SpecAxialResistance getSpecificAxialResistance()

Gets the value of the specificAxialResistance property.

Returns:

possible object is SpecAxialResistance

setSpecificAxialResistance

public void setSpecificAxialResistance(SpecAxialResistance value)

Sets the value of the specificAxialResistance property.

Parameters:

value - allowed object is SpecAxialResistance

getInitialMembPotential

public InitialMembPotential getInitialMembPotential()

Gets the value of the initialMembPotential property.

Returns:

possible object is InitialMembPotential

setInitialMembPotential

public void setInitialMembPotential(InitialMembPotential value)

Sets the value of the initialMembPotential property.

Parameters:

value - allowed object is InitialMembPotential

getIonProperties

public IonProperties getIonProperties()

Gets the value of the ionProperties property.

Returns:

possible object is IonProperties

setIonProperties

public void setIonProperties(IonProperties value)

Sets the value of the ionProperties property.

Parameters:

value - allowed object is IonProperties

getUnits

public Units getUnits()

Gets the value of the units property.

Returns:

possible object is Units

setUnits

public void setUnits(Units value)

Sets the value of the units property.

Parameters:

value - allowed object is Units